Gene-vegetarianism interactions
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Full analysis code
1a. Define Vegetarians
1b. Phenotype prep
Participant QC
Prepare phenotype table
Pheno skim
1c. Genotype prep
2. Matching + Veg. Effect
2. Matching + Veg. Effect
Compare raw phenotype values
3. Vegetarianism GWAS
4. Gene x Vegetarianism GWIS
GWIS in GEM
Make interactive Manhattan plots
Extra scripts
Medication code lists and extra formulas
Max unrelated script
Interactive Manhattan Plots
GWIS (variant level)
GWIS (gene level)
GWAS
GWAS of vegetarianism plots
Mike Francis
2022-10-12 12:08:51
GWAS of vegetarianism: interactive Manhattan plots
Mouse hover over a point to see summary statistics for that SNP/gene. Click on it to go to its dbSNP/gene page.
(Click not work for indels)
GWAS
Vegetarianism
girafe
Vegetarianism (gene-level)
girafe